STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_1Peroxisomal biogenesis factor 2. (428 aa)    
Predicted Functional Partners:
PEX10
Peroxisome biogenesis factor 10.
    
   0.839
PEX12_1
Peroxisome assembly protein 12.
    
 
 0.746
PEX12_0
Peroxisome assembly protein 12.
    
 
 0.746
YFH1
Frataxin, mitochondrial.
     
 0.628
CYC1_0
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
     
 0.624
HMX1_0
Heme-binding protein HMX1.
    
 0.620
HMA5_0
Putative copper-transporting ATPase HMA5.
  
 
 0.579
HMA5_1
Putative copper-transporting ATPase HMA5.
  
 
 0.579
CCC2
Copper-transporting ATPase.
  
 
 0.579
ALO1
D-arabinono-1,4-lactone oxidase.
     
 0.555
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.