STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MET30_0F-box protein MET30. (691 aa)    
Predicted Functional Partners:
SKP1_0
Suppressor of kinetochore protein 1; Belongs to the SKP1 family.
    
 0.997
CDC53_1
Cell division control protein 53; Belongs to the cullin family.
    
 0.994
CDC53_0
Cell division control protein 53; Belongs to the cullin family.
    
 0.994
HRT1_1
RING-box protein HRT1.
    
 0.972
HRT1_0
RING-box protein HRT1.
    
 0.972
GRR1
SCF E3 ubiquitin ligase complex F-box protein GRR1.
    
 0.942
CDC4_0
Cell division control protein 4.
  
 
0.921
CDC4_1
Cell division control protein 4.
  
 
0.921
SWE1_0
Mitosis inhibitor protein kinase SWE1.
    
 0.914
SWE1_1
Mitosis inhibitor protein kinase SWE1.
    
 0.914
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.