Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SPT20_0Transcription factor SPT20. (777 aa)    
Predicted Functional Partners:
TRA1
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
    
   0.823
SPT7
Transcriptional activator SPT7.
    
 
 0.810
sgf73
SAGA-associated factor 73.
    
 
 0.793
Cantr_09780
SANT domain-containing protein.
    
   0.764
Cantr_10625
SANT domain-containing protein.
    
   0.764
CCDC25
Coiled-coil domain-containing protein 25.
    
 0.725
TAF5_0
Transcription initiation factor TFIID subunit 5.
    
   0.678
TAF5_1
Transcription initiation factor TFIID subunit 5.
    
   0.678
SPT3
Protein SPT3.
    
 
 0.641
GCN5_0
Histone acetyltransferase GCN5.
    
   0.615
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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