STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPE1_0Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (458 aa)    
Predicted Functional Partners:
SPE3_1
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 0.960
SPE3_0
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 0.960
CAR1
Arginase; Belongs to the arginase family.
  
 
 0.957
CAR2
Ornithine aminotransferase.
    
 0.955
GBU1_0
Guanidinobutyrase; Belongs to the arginase family.
  
 
 0.949
GBU1_1
Guanidinobutyrase; Belongs to the arginase family.
  
 
 0.949
CBP1
Corticosteroid-binding protein.
     
 0.942
Cantr_06354
Putative agmatinase 1; Belongs to the arginase family.
  
 
 0.911
Cantr_00136
Putative agmatinase 1; Belongs to the arginase family.
  
 
 0.911
Cantr_00140
Putative agmatinase 1; Belongs to the arginase family.
  
 
 0.911
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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