STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSC1_0Chromatin structure-remodeling complex subunit RSC1. (820 aa)    
Predicted Functional Partners:
SFH1
Chromatin structure-remodeling complex subunit SFH1.
    
 0.934
SNF12_1
Transcription regulatory protein SNF12.
    
 0.920
SNF12_0
Transcription regulatory protein SNF12.
    
 0.920
PBRM1_1
Protein polybromo-1.
    
0.914
PBRM1_0
Protein polybromo-1.
    
0.914
STH1_1
Nuclear protein STH1/NPS1.
   
0.913
STH1_0
Nuclear protein STH1/NPS1.
   
0.913
RSC8_0
Chromatin structure-remodeling complex protein RSC8.
   
 0.908
RSC8_1
Chromatin structure-remodeling complex protein RSC8.
   
 0.908
H4_0
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.905
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.