Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSC1_0Chromatin structure-remodeling complex subunit RSC1. (820 aa)    
Predicted Functional Partners:
rsc7_1
Chromatin structure-remodeling complex subunit rsc7.
    
 0.957
rsc7_0
Chromatin structure-remodeling complex subunit rsc7.
    
 0.957
RSC9_0
Chromatin structure-remodeling complex subunit RSC9.
   
 0.953
RSC9_1
Chromatin structure-remodeling complex subunit RSC9.
   
 0.953
STH1_1
Nuclear protein STH1/NPS1.
   
 0.951
STH1_0
Nuclear protein STH1/NPS1.
   
 0.951
PBRM1_1
Protein polybromo-1.
    
0.950
PBRM1_0
Protein polybromo-1.
    
0.950
SFH1
Chromatin structure-remodeling complex subunit SFH1.
   
 0.936
ARP9_1
Actin-like protein ARP9; Belongs to the actin family.
    
 0.935
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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