Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LUC7Protein LUC7. (245 aa)    
Predicted Functional Partners:
SNU71_1
U1 small nuclear ribonucleoprotein component SNU71.
   
 0.988
SNU71_0
U1 small nuclear ribonucleoprotein component SNU71.
   
 0.988
LEA1
U2 small nuclear ribonucleoprotein A.
   
 0.985
SMD3_1
Small nuclear ribonucleoprotein Sm D3.
    
 0.984
smd2_0
Small nuclear ribonucleoprotein Sm D2.
   
 0.984
SNP1_1
U1 small nuclear ribonucleoprotein.
   
 0.982
SNP1_0
U1 small nuclear ribonucleoprotein.
   
 0.982
PRP42_0
U1 small nuclear ribonucleoprotein component PRP42.
   
 0.980
PRP42_1
U1 small nuclear ribonucleoprotein component PRP42.
   
 0.980
BBP_0
Branchpoint-bridging protein.
   
 0.979
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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