STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cantr_07251Uncharacterized protein. (94 aa)    
Predicted Functional Partners:
YDL086W_0
Putative carboxymethylenebutenolidase.
     
 0.642
YDL086W_1
Putative carboxymethylenebutenolidase.
     
 0.642
TUB1
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
   0.640
Cantr_01174
Uncharacterized protein.
    
   0.612
Cantr_05947
Uncharacterized protein.
    
   0.601
ASC1
Guanine nucleotide-binding protein subunit beta-like protein.
    
  0.586
ECI1_2
3,2-trans-enoyl-CoA isomerase.
   
 
  0.517
ECI1_3
3,2-trans-enoyl-CoA isomerase.
   
 
  0.517
ECI1_1
3,2-trans-enoyl-CoA isomerase.
   
 
  0.517
ECI1_0
3,2-trans-enoyl-CoA isomerase.
   
 
  0.517
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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