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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D5_0TBC1 domain family member 5. (444 aa)    
Predicted Functional Partners:
VPS29_0
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.933
VPS29_1
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.933
VPS35_1
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.689
VPS35_0
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.689
PEP8_1
Carboxypeptidase Y-deficient protein 8.
   
 
 0.677
PEP8_0
Carboxypeptidase Y-deficient protein 8.
   
 
 0.677
YPT6_0
GTP-binding protein YPT6.
   
 
 0.610
YPT6_1
GTP-binding protein YPT6.
   
 
 0.610
GYP8
GTPase-activating protein GYP8.
    
 
 0.524
YPT32_0
GTP-binding protein YPT32/YPT11.
    
 
 0.514
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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