STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD17DNA damage checkpoint control protein RAD17. (428 aa)    
Predicted Functional Partners:
RFC2
Replication factor C subunit 2.
   
 0.999
MEC3_1
DNA damage checkpoint control protein MEC3.
    
 0.998
DDC1_1
DNA damage checkpoint protein 1.
    
 0.998
RFC3
Replication factor C subunit 3.
   
 0.998
DDC1_0
DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.
    
 0.998
MEC3_0
DNA damage checkpoint control protein MEC3.
    
 0.998
RAD24_0
Checkpoint protein RAD24.
   
 0.997
RAD24_1
Checkpoint protein RAD24.
   
 0.997
RFC4_1
Replication factor C subunit 4.
   
 0.976
RFC4_0
Replication factor C subunit 4.
   
 0.976
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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