Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BIM1_0 | CIN8_0 | A0A367XQY3 | A0A367Y250 | Protein BIM1. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.543 |
BIM1_0 | CIN8_1 | A0A367XQY3 | A0A367Y9T5 | Protein BIM1. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.543 |
BIM1_0 | DYNC1I2 | A0A367XQY3 | A0A367YJJ6 | Protein BIM1. | Cytoplasmic dynein 1 intermediate chain 2. | 0.629 |
BIM1_0 | TUB1 | A0A367XQY3 | A0A367YKK9 | Protein BIM1. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.977 |
BIM1_0 | TUB2_1 | A0A367XQY3 | A0A367Y468 | Protein BIM1. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.923 |
BIM1_0 | alp14 | A0A367XQY3 | A0A367YJQ8 | Protein BIM1. | Spindle pole body component alp14. | 0.977 |
BIM1_0 | nudA | A0A367XQY3 | A0A367XWK0 | Protein BIM1. | Dynein heavy chain, cytoplasmic. | 0.665 |
BIM1_0 | ro-1 | A0A367XQY3 | A0A367YFK9 | Protein BIM1. | Dynein heavy chain, cytoplasmic. | 0.665 |
BIM1_1 | CIN8_0 | A0A367YFG1 | A0A367Y250 | Protein BIM1. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.543 |
BIM1_1 | CIN8_1 | A0A367YFG1 | A0A367Y9T5 | Protein BIM1. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.543 |
BIM1_1 | DYNC1I2 | A0A367YFG1 | A0A367YJJ6 | Protein BIM1. | Cytoplasmic dynein 1 intermediate chain 2. | 0.629 |
BIM1_1 | TUB1 | A0A367YFG1 | A0A367YKK9 | Protein BIM1. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.977 |
BIM1_1 | TUB2_1 | A0A367YFG1 | A0A367Y468 | Protein BIM1. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.923 |
BIM1_1 | alp14 | A0A367YFG1 | A0A367YJQ8 | Protein BIM1. | Spindle pole body component alp14. | 0.977 |
BIM1_1 | nudA | A0A367YFG1 | A0A367XWK0 | Protein BIM1. | Dynein heavy chain, cytoplasmic. | 0.665 |
BIM1_1 | ro-1 | A0A367YFG1 | A0A367YFK9 | Protein BIM1. | Dynein heavy chain, cytoplasmic. | 0.665 |
CIN8_0 | BIM1_0 | A0A367Y250 | A0A367XQY3 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Protein BIM1. | 0.543 |
CIN8_0 | BIM1_1 | A0A367Y250 | A0A367YFG1 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Protein BIM1. | 0.543 |
CIN8_0 | TUB1 | A0A367Y250 | A0A367YKK9 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.978 |
CIN8_0 | TUB2_1 | A0A367Y250 | A0A367Y468 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.892 |
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