STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP25_1ATPase synthesis protein 25, mitochondrial. (580 aa)    
Predicted Functional Partners:
IMG1
54S ribosomal protein IMG1, mitochondrial.
    
   0.763
MRPL2
54S ribosomal protein L2, mitochondrial.
    
 
 0.643
MRPL38
54S ribosomal protein L38, mitochondrial; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.534
MRPL44_0
54S ribosomal protein L44, mitochondrial.
    
 
 0.518
rplC_1
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.517
rplC_0
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.517
MRPL3
54S ribosomal protein L3, mitochondrial.
    
   0.511
MRPL17
54S ribosomal protein L17, mitochondrial.
    
   0.511
MRPL36
54S ribosomal protein L36, mitochondrial.
    
   0.511
YML6
54S ribosomal protein YmL6, mitochondrial.
    
   0.511
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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