STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT1_1Protein transport protein SFT1. (98 aa)    
Predicted Functional Partners:
GOS1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.995
SEC22_1
Protein transport protein SEC22; Belongs to the synaptobrevin family.
    
 0.992
SED5_0
Integral membrane protein SED5; Belongs to the syntaxin family.
   
 0.991
SED5_1
Integral membrane protein SED5; Belongs to the syntaxin family.
   
 0.991
YKT6_0
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
   
 0.990
YKT6_1
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
   
 0.990
SLY1
Protein SLY1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.982
BOS1_0
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 0.980
BOS1_1
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 0.980
ypt-1_0
GTP-binding protein ypt1.
    
 0.937
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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