STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
afvA_2NADPH dehydrogenase afvA. (428 aa)    
Predicted Functional Partners:
ETR1_1
Putative trans-2-enoyl-CoA reductase 1, mitochondrial.
   
  
 0.804
ETR1_2
Putative trans-2-enoyl-CoA reductase 1, mitochondrial.
   
  
 0.804
ZTA1_1
Putative quinone oxidoreductase.
   
    0.648
ZTA1_0
Putative quinone oxidoreductase.
   
    0.648
CIR1
Putative electron transfer flavoprotein subunit beta.
  
 
 0.565
EBP1_6
Putative NADPH dehydrogenase.
  
 
0.520
ETFA
Electron transfer flavoprotein subunit alpha, mitochondrial.
   
 
 0.508
Cantr_08802
NAD(P)-bd_dom domain-containing protein.
   
 
 0.492
Cantr_01849
NAD(P)-bd_dom domain-containing protein.
   
 
 0.492
SEN2
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
      
 0.477
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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