Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ECM32_1Putative ATP-dependent RNA helicase ECM32. (1089 aa)    
Predicted Functional Partners:
NMD2_1
Nonsense-mediated mRNA decay protein 2.
   
 0.850
UPF3_0
Regulator of nonsense transcripts UPF3.
    
 0.850
UPF3_1
Regulator of nonsense transcripts UPF3.
    
 0.850
NMD2_0
Nonsense-mediated mRNA decay protein 2.
   
 0.850
PAB1_0
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.784
PAB1_1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.784
SUP35_1
Eukaryotic peptide chain release factor GTP-binding subunit.
    
 0.778
SUP35_0
Eukaryotic peptide chain release factor GTP-binding subunit.
    
 0.778
CBC1_1
Nuclear cap-binding protein complex subunit 1.
    
 0.777
CBC1_0
Nuclear cap-binding protein complex subunit 1.
    
 0.777
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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