STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IMP4_1U3 small nucleolar ribonucleoprotein IMP4. (287 aa)    
Predicted Functional Partners:
UTP5
U3 small nucleolar RNA-associated protein 5.
   
  0.998
IMP3_1
U3 small nucleolar ribonucleoprotein IMP3.
   
 0.997
IMP3_0
U3 small nucleolar ribonucleoprotein IMP3.
   
 0.997
RCL1
RNA 3'-terminal phosphate cyclase-like protein.
   
 
 0.996
fcf2
rRNA-processing protein fcf2.
   
   0.995
UTP13
U3 small nucleolar RNA-associated protein 13.
   
   0.995
RPS9A_1
40S ribosomal protein S9-A.
   
 0.994
UTP18_1
U3 small nucleolar RNA-associated protein 18.
   
  0.994
PNO1
Pre-rRNA-processing protein PNO1.
   
 
 0.994
UTP14
U3 small nucleolar RNA-associated protein 14.
   
 
 0.994
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.