STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDH1_4Malate dehydrogenase. (337 aa)    
Predicted Functional Partners:
CIT_0
Citrate synthase; Belongs to the citrate synthase family.
  
 0.993
Got2_1
Aspartate aminotransferase, mitochondrial.
   
 0.970
Got2_0
Aspartate aminotransferase, mitochondrial.
   
 0.970
FUM1_1
Fumarate hydratase, mitochondrial.
  
 0.967
FUM1_0
Fumarate hydratase, mitochondrial.
  
 0.967
MAE1
NAD-dependent malic enzyme, mitochondrial.
  
 0.962
PYC
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 0.961
AAT2_1
Aspartate aminotransferase.
   
 0.956
AAT2_2
Aspartate aminotransferase, cytoplasmic.
   
 0.956
PCK1_1
Phosphoenolpyruvate carboxykinase [ATP].
   
 0.956
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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