Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BRX1_0 | Cantr_01217 | A0A367YC84 | A0A367YI68 | Ribosome biogenesis protein BRX1. | RRM domain-containing protein. | 0.997 |
BRX1_0 | Cantr_06968 | A0A367YC84 | A0A367XVI6 | Ribosome biogenesis protein BRX1. | Putative ribosome biogenesis protein C8F11.04. | 0.997 |
BRX1_0 | EBP2_0 | A0A367YC84 | A0A367YPH4 | Ribosome biogenesis protein BRX1. | rRNA-processing protein EBP2. | 0.995 |
BRX1_0 | EBP2_1 | A0A367YC84 | A0A367XPC2 | Ribosome biogenesis protein BRX1. | rRNA-processing protein EBP2. | 0.995 |
BRX1_0 | HAS1 | A0A367YC84 | A0A367YH98 | Ribosome biogenesis protein BRX1. | RNA helicase. | 0.997 |
BRX1_0 | NIP7 | A0A367YC84 | A0A367XXD6 | Ribosome biogenesis protein BRX1. | 60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.997 |
BRX1_0 | NOG1_1 | A0A367YC84 | A0A367XX85 | Ribosome biogenesis protein BRX1. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.992 |
BRX1_0 | NUG1 | A0A367YC84 | A0A367XRC6 | Ribosome biogenesis protein BRX1. | Nuclear GTP-binding protein NUG1. | 0.995 |
BRX1_0 | RLP24 | A0A367YC84 | A0A367Y164 | Ribosome biogenesis protein BRX1. | Ribosome biogenesis protein RLP24. | 0.995 |
BRX1_0 | RRP1_1 | A0A367YC84 | A0A367XX43 | Ribosome biogenesis protein BRX1. | Ribosomal RNA-processing protein 1. | 0.992 |
Cantr_01217 | BRX1_0 | A0A367YI68 | A0A367YC84 | RRM domain-containing protein. | Ribosome biogenesis protein BRX1. | 0.997 |
Cantr_01217 | Cantr_06968 | A0A367YI68 | A0A367XVI6 | RRM domain-containing protein. | Putative ribosome biogenesis protein C8F11.04. | 0.999 |
Cantr_01217 | EBP2_0 | A0A367YI68 | A0A367YPH4 | RRM domain-containing protein. | rRNA-processing protein EBP2. | 0.997 |
Cantr_01217 | EBP2_1 | A0A367YI68 | A0A367XPC2 | RRM domain-containing protein. | rRNA-processing protein EBP2. | 0.997 |
Cantr_01217 | HAS1 | A0A367YI68 | A0A367YH98 | RRM domain-containing protein. | RNA helicase. | 0.998 |
Cantr_01217 | NIP7 | A0A367YI68 | A0A367XXD6 | RRM domain-containing protein. | 60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.999 |
Cantr_01217 | NOG1_1 | A0A367YI68 | A0A367XX85 | RRM domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.997 |
Cantr_01217 | NUG1 | A0A367YI68 | A0A367XRC6 | RRM domain-containing protein. | Nuclear GTP-binding protein NUG1. | 0.999 |
Cantr_01217 | RLP24 | A0A367YI68 | A0A367Y164 | RRM domain-containing protein. | Ribosome biogenesis protein RLP24. | 0.998 |
Cantr_01217 | RRP1_1 | A0A367YI68 | A0A367XX43 | RRM domain-containing protein. | Ribosomal RNA-processing protein 1. | 0.995 |
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