STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECM32_2Putative ATP-dependent RNA helicase ECM32. (756 aa)    
Predicted Functional Partners:
NMD2_1
Nonsense-mediated mRNA decay protein 2.
   
 0.833
NMD2_0
Nonsense-mediated mRNA decay protein 2.
   
 0.833
UPF3_0
Regulator of nonsense transcripts UPF3.
    
 0.811
UPF3_1
Regulator of nonsense transcripts UPF3.
    
 0.811
DCP1_0
mRNA-decapping enzyme subunit 1.
    
 0.762
DCP1_1
mRNA-decapping enzyme subunit 1.
    
 0.762
PAB1_0
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.735
PAB1_1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.735
TOR2_1
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.723
TOR2_0
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.723
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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