STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cantr_10554Uncharacterized protein. (200 aa)    
Predicted Functional Partners:
ATG13_0
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
    
 0.987
ATG13_1
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
    
 0.987
ATG1
Serine/threonine-protein kinase ATG1.
    
 0.986
ATG11
Autophagy-related protein 11.
    
 0.946
Cantr_05807
DUF3543 domain-containing protein.
    
 0.945
mip1_0
Target of rapamycin complex 1 subunit mip1.
     
 0.924
mip1_1
Target of rapamycin complex 1 subunit mip1.
     
 0.924
TOR2_1
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
     
 0.918
TOR2_0
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
     
 0.918
LST8_0
Target of rapamycin complex subunit LST8.
     
 0.897
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.