STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA34_1DNA-directed RNA polymerase I subunit RPA34. (240 aa)    
Predicted Functional Partners:
RPA2
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.995
RPA43_0
DNA-directed RNA polymerase I subunit RPA43.
   
 0.992
RPA43_1
DNA-directed RNA polymerase I subunit RPA43.
   
 0.992
RPC10_1
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
   
 0.992
RPB10_0
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
   
 0.989
RPA49_1
DNA-directed RNA polymerase I subunit RPA49.
   
 0.988
RPC40_1
DNA-directed RNA polymerases I and III subunit RPAC1.
   
 0.988
RPC40_0
DNA-directed RNA polymerases I and III subunit RPAC1.
   
 0.988
RPA49_0
DNA-directed RNA polymerase I subunit RPA49.
   
 0.988
RPA12_1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.987
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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