STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUE1Coupling of ubiquitin conjugation to ER degradation protein 1. (204 aa)    
Predicted Functional Partners:
not1
General negative regulator of transcription subunit 1.
   
 0.990
Cantr_01277
Uncharacterized protein.
    
 
 0.988
UBC7
Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.988
Cnot8
CCR4-NOT transcription complex subunit 8.
   
 0.986
CAF40_0
Protein CAF40.
    
 0.949
CAF40_1
Protein CAF40.
    
 0.949
CCR4_3
Glucose-repressible alcohol dehydrogenase transcriptional effector.
    
 0.934
CCR4_1
Glucose-repressible alcohol dehydrogenase transcriptional effector.
    
 0.934
MOT2_0
General negative regulator of transcription subunit 4.
    
 0.908
MOT2_1
General negative regulator of transcription subunit 4.
    
 0.908
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.