STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDR1_2Pleiotropic ABC efflux transporter of multiple drugs CDR1; Belongs to the ABC transporter superfamily. (1501 aa)    
Predicted Functional Partners:
YOR1_2
Oligomycin resistance ATP-dependent permease YOR1.
   
 0.639
YOR1_1
Oligomycin resistance ATP-dependent permease YOR1.
   
 0.639
CDR4
ABC transporter CDR4.
  
 
 
0.609
TAP42
Type 2A phosphatase-associated protein 42.
    
 0.557
YOR1_3
Oligomycin resistance ATP-dependent permease YOR1.
    
 0.552
YOR1_0
Oligomycin resistance ATP-dependent permease YOR1.
    
 0.552
YOR1_4
Oligomycin resistance ATP-dependent permease YOR1.
    
 0.543
YOR1_5
Oligomycin resistance ATP-dependent permease YOR1.
    
 0.543
ERG11
Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family.
    
 
 0.532
HAL9
Halotolerance protein 9.
    
 
 0.518
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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