STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GYP7_1GTPase-activating protein GYP7. (748 aa)    
Predicted Functional Partners:
ATG8_1
Autophagy-related protein.
   
 0.874
FIS1
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
    
 0.801
YPT7_1
GTP-binding protein YPT7.
   
 0.757
Rab7a
Ras-related protein Rab-7a.
   
 0.757
ypt71
GTP-binding protein ypt71.
   
 0.757
SEC4_0
Ras-related protein SEC4.
    
 0.719
SEC4_1
Ras-related protein SEC4.
    
 0.719
ypt-1_0
GTP-binding protein ypt1.
     
 0.643
Cantr_05824
WW domain-containing protein.
     
 0.643
MDR1_2
GTPase-activating protein GYP2.
      
 0.597
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.