Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AVT1_1 | GTR1_0 | A0A367YLN4 | A0A367YP18 | Vacuolar amino acid transporter 1. | GTP-binding protein GTR1. | 0.658 |
AVT1_1 | GTR1_1 | A0A367YLN4 | A0A367XLX2 | Vacuolar amino acid transporter 1. | GTP-binding protein GTR1. | 0.658 |
AVT1_1 | GTR2_0 | A0A367YLN4 | A0A367Y0L8 | Vacuolar amino acid transporter 1. | GTP-binding protein GTR2. | 0.634 |
AVT1_1 | GTR2_1 | A0A367YLN4 | A0A367Y8P7 | Vacuolar amino acid transporter 1. | GTP-binding protein GTR2. | 0.634 |
AVT1_1 | SPC2 | A0A367YLN4 | A0A367Y285 | Vacuolar amino acid transporter 1. | Signal peptidase complex subunit SPC2. | 0.609 |
AVT1_1 | Traf4_0 | A0A367YLN4 | A0A367Y137 | Vacuolar amino acid transporter 1. | TNF receptor-associated factor 4. | 0.661 |
AVT1_1 | Traf4_1 | A0A367YLN4 | A0A367YBZ1 | Vacuolar amino acid transporter 1. | TNF receptor-associated factor 4. | 0.661 |
AVT1_1 | VMA2_0 | A0A367YLN4 | A0A367Y136 | Vacuolar amino acid transporter 1. | Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. | 0.542 |
AVT1_1 | VMA3_0 | A0A367YLN4 | A0A367YFW2 | Vacuolar amino acid transporter 1. | V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. | 0.606 |
AVT1_1 | VMA6 | A0A367YLN4 | A0A367Y0Z4 | Vacuolar amino acid transporter 1. | V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. The active enzyme consists of a catalytic V1 domain attached to an integral membrane V0 proton pore complex. This subunit is a non-integral membrane component of the membrane pore domain and is required for proper assembly of the V0 sector. Might be involved in the regulated assembly of V1 subunits onto the membrane sector or alternatively may prevent the passage of protons through V0 pores; Belongs to the V-ATPase V0D/AC39 subunit family. | 0.570 |
GTR1_0 | AVT1_1 | A0A367YP18 | A0A367YLN4 | GTP-binding protein GTR1. | Vacuolar amino acid transporter 1. | 0.658 |
GTR1_0 | GTR2_0 | A0A367YP18 | A0A367Y0L8 | GTP-binding protein GTR1. | GTP-binding protein GTR2. | 0.991 |
GTR1_0 | GTR2_1 | A0A367YP18 | A0A367Y8P7 | GTP-binding protein GTR1. | GTP-binding protein GTR2. | 0.991 |
GTR1_0 | VMA2_0 | A0A367YP18 | A0A367Y136 | GTP-binding protein GTR1. | Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. | 0.783 |
GTR1_0 | VMA3_0 | A0A367YP18 | A0A367YFW2 | GTP-binding protein GTR1. | V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. | 0.805 |
GTR1_0 | VMA6 | A0A367YP18 | A0A367Y0Z4 | GTP-binding protein GTR1. | V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. The active enzyme consists of a catalytic V1 domain attached to an integral membrane V0 proton pore complex. This subunit is a non-integral membrane component of the membrane pore domain and is required for proper assembly of the V0 sector. Might be involved in the regulated assembly of V1 subunits onto the membrane sector or alternatively may prevent the passage of protons through V0 pores; Belongs to the V-ATPase V0D/AC39 subunit family. | 0.792 |
GTR1_1 | AVT1_1 | A0A367XLX2 | A0A367YLN4 | GTP-binding protein GTR1. | Vacuolar amino acid transporter 1. | 0.658 |
GTR1_1 | GTR2_0 | A0A367XLX2 | A0A367Y0L8 | GTP-binding protein GTR1. | GTP-binding protein GTR2. | 0.991 |
GTR1_1 | GTR2_1 | A0A367XLX2 | A0A367Y8P7 | GTP-binding protein GTR1. | GTP-binding protein GTR2. | 0.991 |
GTR1_1 | VMA2_0 | A0A367XLX2 | A0A367Y136 | GTP-binding protein GTR1. | Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. | 0.783 |
page 1 of 3