STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BET1_0Protein transport protein BET1. (150 aa)    
Predicted Functional Partners:
SEC22_1
Protein transport protein SEC22; Belongs to the synaptobrevin family.
   
 0.998
SLY1
Protein SLY1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.995
SED5_0
Integral membrane protein SED5; Belongs to the syntaxin family.
   
 0.995
BOS1_0
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 0.995
BOS1_1
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 0.995
SED5_1
Integral membrane protein SED5; Belongs to the syntaxin family.
   
 0.995
GOS1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.995
YKT6_0
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
    
 0.984
YKT6_1
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
    
 0.984
Cantr_05877
Uncharacterized protein.
    
 0.947
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.