Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mntHDivalent metal cation transporter; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. (413 aa)    
Predicted Functional Partners:
mntR
Transcriptional regulator MntR; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.841
accA1_3
Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.706
nhaA
Na(+)/H(+) antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
     
 0.698
zitB
Zinc transporter ZitB; Involved in zinc efflux across the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.488
ybgL
Lactam utilization protein LamB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
  
 0.452
sodA
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
      
 0.443
kipI
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.413
mntB_1
Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.400
znuB
Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.400
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea herbicola, Pantoea sp. SL1_M5, Pseudomonas herbicola, bacterium G33-1
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