Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cvpA | phzF | BEE12_01215 | BEE12_05965 | Membrane protein required for colicin V production; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenazine biosynthesis protein PhzF family; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.602 |
| gstB_1 | phzF | BEE12_05960 | BEE12_05965 | Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenazine biosynthesis protein PhzF family; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.586 |
| pabA | phzF | BEE12_05090 | BEE12_05965 | Anthranilate/aminodeoxychorismate synthase component II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenazine biosynthesis protein PhzF family; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.708 |
| phzF | cvpA | BEE12_05965 | BEE12_01215 | Phenazine biosynthesis protein PhzF family; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein required for colicin V production; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.602 |
| phzF | gstB_1 | BEE12_05965 | BEE12_05960 | Phenazine biosynthesis protein PhzF family; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.586 |
| phzF | pabA | BEE12_05965 | BEE12_05090 | Phenazine biosynthesis protein PhzF family; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anthranilate/aminodeoxychorismate synthase component II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.708 |
| phzF | ubiC | BEE12_05965 | BEE12_08060 | Phenazine biosynthesis protein PhzF family; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chorismate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway. | 0.435 |
| ubiC | phzF | BEE12_08060 | BEE12_05965 | Chorismate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway. | Phenazine biosynthesis protein PhzF family; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.435 |