Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AOE40100.1ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (735 aa)    
Predicted Functional Partners:
BEE12_09725
Transcription antiterminator BglG; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.984
prsE
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.960
AOE40101.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.951
apxIB_1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.905
AOE40102.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.905
pstB3
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.899
pstB
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.899
artM_6
D-amino-acid oxidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     
0.898
tcyC_2
Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     
0.883
bepC
Type I secretion system outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.862
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea herbicola, Pantoea sp. SL1_M5, Pseudomonas herbicola, bacterium G33-1
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