STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOE41070.1Nitrate/bicarbonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)    
Predicted Functional Partners:
AOE41072.1
Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
AOE41071.1
Nitrate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
AOE41073.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
narH_2
Nitrate reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.907
narI_2
Respiratory nitrate reductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.906
ssuB_1
Aliphatic sulfonates ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
 0.905
narG_1
Nitrate reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.902
tauB
Taurine transporter ATP-binding subunit; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
    0.869
AOE41069.1
Transcription antitermination regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.837
ssuC_1
Taurine dioxygenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.709
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea herbicola, Pantoea sp. SL1_M5, Pseudomonas herbicola, bacterium G33-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.