Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOE40887.1 | AOE41728.1 | BEE12_14125 | BEE12_18785 | Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. | Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.848 |
| AOE40887.1 | cheZ | BEE12_14125 | BEE12_18495 | Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. | Protein phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.715 |
| AOE40887.1 | flhC | BEE12_14125 | BEE12_18550 | Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. | Transcriptional regulator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family. | 0.788 |
| AOE40887.1 | flhD | BEE12_14125 | BEE12_18555 | Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. | Flagellar transcriptional activator FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways. | 0.764 |
| AOE40887.1 | fliA | BEE12_14125 | BEE12_18660 | Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. | RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | 0.887 |
| AOE40887.1 | fliJ | BEE12_14125 | BEE12_18795 | Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. | Flagellar biosynthesis chaperone FliJ; Flagellar protein that affects chemotactic events. Belongs to the FliJ family. | 0.882 |
| AOE40887.1 | fliL | BEE12_14125 | BEE12_18805 | Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.977 |
| AOE40887.1 | motA | BEE12_14125 | BEE12_18545 | Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. | Flagellar motor stator protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.935 |
| AOE41728.1 | AOE40887.1 | BEE12_18785 | BEE12_14125 | Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. | 0.848 |
| AOE41728.1 | cheA_1 | BEE12_18785 | BEE12_18535 | Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.720 |
| AOE41728.1 | cheZ | BEE12_18785 | BEE12_18495 | Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.841 |
| AOE41728.1 | flhC | BEE12_18785 | BEE12_18550 | Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family. | 0.570 |
| AOE41728.1 | flhD | BEE12_18785 | BEE12_18555 | Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar transcriptional activator FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways. | 0.780 |
| AOE41728.1 | fliA | BEE12_18785 | BEE12_18660 | Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | 0.680 |
| AOE41728.1 | fliJ | BEE12_18785 | BEE12_18795 | Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar biosynthesis chaperone FliJ; Flagellar protein that affects chemotactic events. Belongs to the FliJ family. | 0.993 |
| AOE41728.1 | fliL | BEE12_18785 | BEE12_18805 | Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.969 |
| AOE41728.1 | motA | BEE12_18785 | BEE12_18545 | Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar motor stator protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.837 |
| cdgR | flhD | BEE12_15395 | BEE12_18555 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar transcriptional activator FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways. | 0.755 |
| cheA_1 | AOE41728.1 | BEE12_18535 | BEE12_18785 | Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.720 |
| cheA_1 | cheZ | BEE12_18535 | BEE12_18495 | Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.980 |
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