STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQL44328.1Sporulation integral membrane protein YlbJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)    
Predicted Functional Partners:
KQL49248.1
Spore maturation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.842
KQL48972.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.840
KQL48971.1
Stage IV sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.838
KQL46567.1
Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.822
KQL46610.1
Stage II sporulation protein R; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.819
KQL44137.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.817
KQL47012.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.804
KQL50137.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.803
KQL49213.1
Stage II sporulation protein M; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.794
KQL47004.1
Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.782
Your Current Organism:
Brevibacillus choshinensis
NCBI taxonomy Id: 54911
Other names: ATCC 51359, B. choshinensis, Bacillus choshinensis, CIP 103838, DSM 8552, IFO 15518, JCM 8505, LMG 15968, LMG:15968, NBRC 15518, NCIMB 13345, NRRL B-23247, strain HPD52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.