Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KZE40884.1 | KZE40903.1 | AV540_03255 | AV540_03260 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.466 |
KZE40903.1 | KZE40884.1 | AV540_03260 | AV540_03255 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.466 |
KZE40903.1 | KZE49487.1 | AV540_03260 | AV540_15315 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.648 |
KZE40903.1 | fur | AV540_03260 | AV540_04830 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. | 0.430 |
KZE40903.1 | perR | AV540_03260 | AV540_13835 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. | 0.430 |
KZE40903.1 | zur | AV540_03260 | AV540_22275 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. | 0.430 |
KZE49487.1 | KZE40903.1 | AV540_15315 | AV540_03260 | NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.648 |
fur | KZE40903.1 | AV540_04830 | AV540_03260 | Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |
perR | KZE40903.1 | AV540_13835 | AV540_03260 | Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |
zur | KZE40903.1 | AV540_22275 | AV540_03260 | Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |