Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZE39348.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)    
Predicted Functional Partners:
KZE39349.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.995
KZE39347.1
Citrate lyase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.983
KZE39350.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.965
KZE39346.1
Tellurite resistance TerB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.899
KZE39354.1
Tellurium resistance protein TerA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.890
yceC
Stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.887
KZE39357.1
Carbamoyl-phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.869
yceD
Chemical-damaging agent resistance protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.859
yceE
Chemical-damaging agent resistance protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.850
ycbR
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.807
Your Current Organism:
Brevibacillus parabrevis
NCBI taxonomy Id: 54914
Other names: ATCC 10027, B. parabrevis, Bacillus parabrevis, CIP 103840, DSM 8376, IFO 12334, JCM 8506, LMG 15971, LMG:15971, NBRC 12334, NCIMB 13346, NRRL NRS-605, NRRL NRS-815
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