Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KZE55322.1 | KZE55323.1 | AV540_04510 | AV540_04515 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.668 |
KZE55322.1 | yqhR | AV540_04510 | AV540_04520 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.461 |
KZE55323.1 | KZE55322.1 | AV540_04515 | AV540_04510 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.668 |
KZE55323.1 | aroQ_1 | AV540_04515 | AV540_04525 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.456 |
KZE55323.1 | pepQ_1 | AV540_04515 | AV540_04530 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xaa-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.463 |
KZE55323.1 | yqhR | AV540_04515 | AV540_04520 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.530 |
aroQ_1 | KZE55323.1 | AV540_04525 | AV540_04515 | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.456 |
aroQ_1 | pepQ_1 | AV540_04525 | AV540_04530 | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | Xaa-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.828 |
aroQ_1 | yqhR | AV540_04525 | AV540_04520 | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.473 |
pepQ_1 | KZE55323.1 | AV540_04530 | AV540_04515 | Xaa-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.463 |
pepQ_1 | aroQ_1 | AV540_04530 | AV540_04525 | Xaa-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.828 |
pepQ_1 | yqhR | AV540_04530 | AV540_04520 | Xaa-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.414 |
yqhR | KZE55322.1 | AV540_04520 | AV540_04510 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.461 |
yqhR | KZE55323.1 | AV540_04520 | AV540_04515 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.530 |
yqhR | aroQ_1 | AV540_04520 | AV540_04525 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.473 |
yqhR | pepQ_1 | AV540_04520 | AV540_04530 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xaa-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.414 |