Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cadC_2ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)    
Predicted Functional Partners:
KZE48412.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.807
KZE46991.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.796
AV540_03065
Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.793
KZE48301.1
ATPase P; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.692
noxC
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.591
KZE49041.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.538
KZE52804.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.534
KZE52801.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.522
KZE52805.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
KZE44098.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.502
Your Current Organism:
Brevibacillus parabrevis
NCBI taxonomy Id: 54914
Other names: ATCC 10027, B. parabrevis, Bacillus parabrevis, CIP 103840, DSM 8376, IFO 12334, JCM 8506, LMG 15971, LMG:15971, NBRC 12334, NCIMB 13346, NRRL NRS-605, NRRL NRS-815
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