Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KZE42833.1 | lysA | AV540_25525 | AV540_04955 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.644 |
| KZE42833.1 | lysA1 | AV540_25525 | AV540_10985 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.644 |
| KZE42833.1 | ywrO | AV540_25525 | AV540_18460 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.511 |
| KZE47789.1 | KZE52415.1 | AV540_18650 | AV540_11185 | Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology. | LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.443 |
| KZE47789.1 | KZE53979.1 | AV540_18650 | AV540_07050 | Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology. | LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
| KZE47789.1 | lysA | AV540_18650 | AV540_04955 | Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.710 |
| KZE47789.1 | lysA1 | AV540_18650 | AV540_10985 | Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.709 |
| KZE47789.1 | ywrO | AV540_18650 | AV540_18460 | Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology. | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.511 |
| KZE51935.1 | ywrO | AV540_11680 | AV540_18460 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.507 |
| KZE52415.1 | KZE47789.1 | AV540_11185 | AV540_18650 | LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.443 |
| KZE52415.1 | lysA | AV540_11185 | AV540_04955 | LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.690 |
| KZE52415.1 | lysA1 | AV540_11185 | AV540_10985 | LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.692 |
| KZE52415.1 | ywrO | AV540_11185 | AV540_18460 | LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology. | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.511 |
| KZE53979.1 | KZE47789.1 | AV540_07050 | AV540_18650 | LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
| KZE53979.1 | lysA | AV540_07050 | AV540_04955 | LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.644 |
| KZE53979.1 | lysA1 | AV540_07050 | AV540_10985 | LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.691 |
| KZE53979.1 | ywrO | AV540_07050 | AV540_18460 | LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology. | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.511 |
| gerN | ywrO | AV540_17285 | AV540_18460 | Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.544 |
| lysA | KZE42833.1 | AV540_04955 | AV540_25525 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.644 |
| lysA | KZE47789.1 | AV540_04955 | AV540_18650 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.710 |
page 1 of 3