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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZE46840.1Stage IV sporulation protein FB; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)    
Predicted Functional Partners:
KZE46839.1
Stage IV sporulation protein FA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.943
minD
Septum site-determining protein MinD; ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.580
spoIIM
Stage II sporulation protein M; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.575
minC
Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
       0.574
spoIIIAB
Stage III sporulation protein AB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.491
cspLB_1
Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.470
KZE46842.1
Ribonuclease G; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.467
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.467
KZE46844.1
Ribosomal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.467
spoIVB
SpoIVB peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.466
Your Current Organism:
Brevibacillus parabrevis
NCBI taxonomy Id: 54914
Other names: ATCC 10027, B. parabrevis, Bacillus parabrevis, CIP 103840, DSM 8376, IFO 12334, JCM 8506, LMG 15971, LMG:15971, NBRC 12334, NCIMB 13346, NRRL NRS-605, NRRL NRS-815
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