Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AV540_25675 | tpn_2 | AV540_25675 | AV540_25630 | 23S ribosomal RNA; Incomplete; too short partial abutting assembly gap; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.457 |
KZE42249.1 | tpn_2 | AV540_25625 | AV540_25630 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.427 |
KZE42251.1 | KZE48858.1 | AV540_25635 | AV540_16500 | Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
KZE42251.1 | tpn_2 | AV540_25635 | AV540_25630 | Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.788 |
KZE42394.1 | KZE48858.1 | AV540_25595 | AV540_16500 | Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.459 |
KZE42394.1 | tpn_2 | AV540_25595 | AV540_25630 | Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.599 |
KZE48858.1 | KZE42251.1 | AV540_16500 | AV540_25635 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
KZE48858.1 | KZE42394.1 | AV540_16500 | AV540_25595 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.459 |
KZE48858.1 | tpn_2 | AV540_16500 | AV540_25630 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.466 |
tpn_2 | AV540_25675 | AV540_25630 | AV540_25675 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 23S ribosomal RNA; Incomplete; too short partial abutting assembly gap; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.457 |
tpn_2 | KZE42249.1 | AV540_25630 | AV540_25625 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.427 |
tpn_2 | KZE42251.1 | AV540_25630 | AV540_25635 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.788 |
tpn_2 | KZE42394.1 | AV540_25630 | AV540_25595 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.599 |
tpn_2 | KZE48858.1 | AV540_25630 | AV540_16500 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.466 |