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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZE39146.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (113 aa)    
Predicted Functional Partners:
dnaC
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
 
 
 0.901
dnaD
DNA replication protein DnaD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.834
KZE39147.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
KZE45030.1
DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
yqeH
Ribosome biogenesis GTPase YqeH; In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.752
KZE48822.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.716
KZE54034.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.703
KZE46910.1
Sporulation protein SpoIID; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.694
ywfO
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.666
KZE39145.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.655
Your Current Organism:
Brevibacillus parabrevis
NCBI taxonomy Id: 54914
Other names: ATCC 10027, B. parabrevis, Bacillus parabrevis, CIP 103840, DSM 8376, IFO 12334, JCM 8506, LMG 15971, LMG:15971, NBRC 12334, NCIMB 13346, NRRL NRS-605, NRRL NRS-815
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