Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KNB74557.1TOPRIM domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (115 aa)    
Predicted Functional Partners:
KNB71966.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.598
KNB74556.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.546
KNB71776.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.535
KNB68454.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.489
KNB74558.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.478
KNB74001.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.466
KNB70142.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.442
KNB70147.1
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.441
KNB72800.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.417
KNB74703.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.407
Your Current Organism:
Brevibacillus reuszeri
NCBI taxonomy Id: 54915
Other names: ATCC 51665, B. reuszeri, Bacillus reuszeri, CIP 104543, DSM 9887, IFO 15719, JCM 9170, LMG 16012, LMG:16012, NBRC 15719, strain H.W. Reuszer Army strain 39
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