Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KNB73246.1Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)    
Predicted Functional Partners:
KNB73247.1
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.973
KNB74123.1
D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.951
KNB72002.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.886
KNB70099.1
D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.879
KNB69375.1
D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.878
KNB68527.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.878
KNB71986.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.877
KNB70002.1
D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.877
KNB71990.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.876
KNB72088.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.875
Your Current Organism:
Brevibacillus reuszeri
NCBI taxonomy Id: 54915
Other names: ATCC 51665, B. reuszeri, Bacillus reuszeri, CIP 104543, DSM 9887, IFO 15719, JCM 9170, LMG 16012, LMG:16012, NBRC 15719, strain H.W. Reuszer Army strain 39
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