STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB73757.1HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)    
Predicted Functional Partners:
KNB74164.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.916
KNB73759.1
Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.895
KNB73976.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.824
KNB74381.1
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.788
KNB74380.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.787
KNB71311.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.776
KNB72068.1
Homocysteine methyltransferase; Catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.772
KNB74382.1
DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.767
KNB74377.1
Phage-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.765
KNB74375.1
Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.759
Your Current Organism:
Brevibacillus reuszeri
NCBI taxonomy Id: 54915
Other names: ATCC 51665, B. reuszeri, Bacillus reuszeri, CIP 104543, DSM 9887, IFO 15719, JCM 9170, LMG 16012, LMG:16012, NBRC 15719, strain H.W. Reuszer Army strain 39
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