STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB71399.1Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (689 aa)    
Predicted Functional Partners:
KNB73311.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.922
KNB69437.1
Beta-hexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.898
KNB73555.1
Penicillin-binding protein, beta-lactamase class C; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.791
KNB73315.1
N-acetylglucosamine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.627
KNB68812.1
N-acetylglucosamine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.625
KNB71398.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.487
murQ-2
N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
    0.435
murQ
N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
    0.433
KNB68929.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.414
Your Current Organism:
Brevibacillus reuszeri
NCBI taxonomy Id: 54915
Other names: ATCC 51665, B. reuszeri, Bacillus reuszeri, CIP 104543, DSM 9887, IFO 15719, JCM 9170, LMG 16012, LMG:16012, NBRC 15719, strain H.W. Reuszer Army strain 39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.