STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCX92912.1Hypothetical protein. (135 aa)    
Predicted Functional Partners:
SCX92862.1
Cytochrome c553.
 
   
 0.854
SCY72150.1
Cytochrome c oxidase cbb3-type subunit 4.
  
     0.559
SCY26662.1
Hypothetical protein.
  
     0.533
SCX92960.1
Metallo-beta-lactamase family protein.
       0.499
SCY29172.1
Predicted nicotinamide N-methyase.
  
     0.495
SCZ07850.1
Hypothetical protein.
  
     0.452
SCX92998.1
Uncharacterized membrane protein.
 
     0.441
SCY22577.1
Protease inhibitor Inh.
  
     0.431
SCY98206.1
Hypothetical protein.
 
     0.414
Your Current Organism:
Microvirga guangxiensis
NCBI taxonomy Id: 549386
Other names: CGMCC 1.7666, JCM 15710, M. guangxiensis, Microvirga guangxiensis Zhang et al. 2009, Microvirga sp. 25B, strain 25B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.