Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCX98394.1 | SCY02318.1 | SAMN02927923_00477 | SAMN02927923_00582 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.440 |
SCX98394.1 | SCY52534.1 | SAMN02927923_00477 | SAMN02927923_01563 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Glutamine amidotransferase. | 0.813 |
SCX98394.1 | SCY73432.1 | SAMN02927923_00477 | SAMN02927923_02195 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | OHCU decarboxylase. | 0.704 |
SCX98394.1 | argC | SAMN02927923_00477 | SAMN02927923_02345 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. | 0.527 |
SCX98394.1 | argG | SAMN02927923_00477 | SAMN02927923_01533 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.486 |
SCY02318.1 | SCX98394.1 | SAMN02927923_00582 | SAMN02927923_00477 | ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.440 |
SCY52534.1 | SCX98394.1 | SAMN02927923_01563 | SAMN02927923_00477 | Glutamine amidotransferase. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.813 |
SCY73432.1 | SCX98394.1 | SAMN02927923_02195 | SAMN02927923_00477 | OHCU decarboxylase. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.704 |
argC | SCX98394.1 | SAMN02927923_02345 | SAMN02927923_00477 | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.527 |
argC | argG | SAMN02927923_02345 | SAMN02927923_01533 | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.962 |
argG | SCX98394.1 | SAMN02927923_01533 | SAMN02927923_00477 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.486 |
argG | argC | SAMN02927923_01533 | SAMN02927923_02345 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. | 0.962 |