Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCY00548.1 | SCY00586.1 | SAMN02927923_00540 | SAMN02927923_00541 | Thioredoxin reductase (NADPH). | Galactose mutarotase. | 0.503 |
SCY00586.1 | SCY00548.1 | SAMN02927923_00541 | SAMN02927923_00540 | Galactose mutarotase. | Thioredoxin reductase (NADPH). | 0.503 |
SCY00586.1 | SCY26047.1 | SAMN02927923_00541 | SAMN02927923_00985 | Galactose mutarotase. | Glycosyl hydrolases family 2, TIM barrel domain; Belongs to the glycosyl hydrolase 2 family. | 0.528 |
SCY00586.1 | SCY29712.1 | SAMN02927923_00541 | SAMN02927923_01086 | Galactose mutarotase. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.451 |
SCY00586.1 | SCY56481.1 | SAMN02927923_00541 | SAMN02927923_01692 | Galactose mutarotase. | Phosphoglucomutase. | 0.505 |
SCY00586.1 | SCY72275.1 | SAMN02927923_00541 | SAMN02927923_02137 | Galactose mutarotase. | Aldo/keto reductase. | 0.433 |
SCY00586.1 | SCY87595.1 | SAMN02927923_00541 | SAMN02927923_02640 | Galactose mutarotase. | Glucose-6-phosphate isomerase. | 0.499 |
SCY00586.1 | SCZ03388.1 | SAMN02927923_00541 | SAMN02927923_03573 | Galactose mutarotase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.517 |
SCY00586.1 | SCZ03414.1 | SAMN02927923_00541 | SAMN02927923_03576 | Galactose mutarotase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.544 |
SCY00586.1 | tal | SAMN02927923_00541 | SAMN02927923_01633 | Galactose mutarotase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.520 |
SCY26047.1 | SCY00586.1 | SAMN02927923_00985 | SAMN02927923_00541 | Glycosyl hydrolases family 2, TIM barrel domain; Belongs to the glycosyl hydrolase 2 family. | Galactose mutarotase. | 0.528 |
SCY26047.1 | SCY29712.1 | SAMN02927923_00985 | SAMN02927923_01086 | Glycosyl hydrolases family 2, TIM barrel domain; Belongs to the glycosyl hydrolase 2 family. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.665 |
SCY26047.1 | SCY72275.1 | SAMN02927923_00985 | SAMN02927923_02137 | Glycosyl hydrolases family 2, TIM barrel domain; Belongs to the glycosyl hydrolase 2 family. | Aldo/keto reductase. | 0.600 |
SCY26047.1 | tal | SAMN02927923_00985 | SAMN02927923_01633 | Glycosyl hydrolases family 2, TIM barrel domain; Belongs to the glycosyl hydrolase 2 family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.403 |
SCY29712.1 | SCY00586.1 | SAMN02927923_01086 | SAMN02927923_00541 | Glucokinase; Belongs to the bacterial glucokinase family. | Galactose mutarotase. | 0.451 |
SCY29712.1 | SCY26047.1 | SAMN02927923_01086 | SAMN02927923_00985 | Glucokinase; Belongs to the bacterial glucokinase family. | Glycosyl hydrolases family 2, TIM barrel domain; Belongs to the glycosyl hydrolase 2 family. | 0.665 |
SCY29712.1 | SCY56481.1 | SAMN02927923_01086 | SAMN02927923_01692 | Glucokinase; Belongs to the bacterial glucokinase family. | Phosphoglucomutase. | 0.721 |
SCY29712.1 | SCY87595.1 | SAMN02927923_01086 | SAMN02927923_02640 | Glucokinase; Belongs to the bacterial glucokinase family. | Glucose-6-phosphate isomerase. | 0.777 |
SCY29712.1 | SCZ03388.1 | SAMN02927923_01086 | SAMN02927923_03573 | Glucokinase; Belongs to the bacterial glucokinase family. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.740 |
SCY29712.1 | SCZ03414.1 | SAMN02927923_01086 | SAMN02927923_03576 | Glucokinase; Belongs to the bacterial glucokinase family. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.777 |
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