Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCX90911.1 | SCY53079.1 | SAMN02927923_00276 | SAMN02927923_01580 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | Glyoxylase, beta-lactamase superfamily II. | 0.654 |
SCX90911.1 | SCY64876.1 | SAMN02927923_00276 | SAMN02927923_01820 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | 0.835 |
SCX90911.1 | SCY77925.1 | SAMN02927923_00276 | SAMN02927923_02237 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | TIGR01244 family protein. | 0.451 |
SCX90911.1 | gloB | SAMN02927923_00276 | SAMN02927923_01057 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.654 |
SCX92512.1 | SCY53079.1 | SAMN02927923_00317 | SAMN02927923_01580 | Hypothetical protein. | Glyoxylase, beta-lactamase superfamily II. | 0.654 |
SCX92512.1 | SCY64876.1 | SAMN02927923_00317 | SAMN02927923_01820 | Hypothetical protein. | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | 0.835 |
SCX92512.1 | SCY77925.1 | SAMN02927923_00317 | SAMN02927923_02237 | Hypothetical protein. | TIGR01244 family protein. | 0.451 |
SCX92512.1 | gloB | SAMN02927923_00317 | SAMN02927923_01057 | Hypothetical protein. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.654 |
SCX96038.1 | SCY53079.1 | SAMN02927923_00407 | SAMN02927923_01580 | Lactoylglutathione lyase. | Glyoxylase, beta-lactamase superfamily II. | 0.659 |
SCX96038.1 | SCY64876.1 | SAMN02927923_00407 | SAMN02927923_01820 | Lactoylglutathione lyase. | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | 0.719 |
SCX96038.1 | SCZ14418.1 | SAMN02927923_00407 | SAMN02927923_04549 | Lactoylglutathione lyase. | Lactoylglutathione lyase. | 0.717 |
SCX96038.1 | gloB | SAMN02927923_00407 | SAMN02927923_01057 | Lactoylglutathione lyase. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.903 |
SCY28712.1 | gloB | SAMN02927923_01058 | SAMN02927923_01057 | Acetyltransferase (GNAT) family protein. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.697 |
SCY30883.1 | SCY53079.1 | SAMN02927923_01117 | SAMN02927923_01580 | Hypothetical protein. | Glyoxylase, beta-lactamase superfamily II. | 0.760 |
SCY30883.1 | SCY64876.1 | SAMN02927923_01117 | SAMN02927923_01820 | Hypothetical protein. | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | 0.729 |
SCY30883.1 | SCY77925.1 | SAMN02927923_01117 | SAMN02927923_02237 | Hypothetical protein. | TIGR01244 family protein. | 0.731 |
SCY30883.1 | gloB | SAMN02927923_01117 | SAMN02927923_01057 | Hypothetical protein. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.760 |
SCY53079.1 | SCX90911.1 | SAMN02927923_01580 | SAMN02927923_00276 | Glyoxylase, beta-lactamase superfamily II. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.654 |
SCY53079.1 | SCX92512.1 | SAMN02927923_01580 | SAMN02927923_00317 | Glyoxylase, beta-lactamase superfamily II. | Hypothetical protein. | 0.654 |
SCY53079.1 | SCX96038.1 | SAMN02927923_01580 | SAMN02927923_00407 | Glyoxylase, beta-lactamase superfamily II. | Lactoylglutathione lyase. | 0.659 |
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