STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY43671.1Hypothetical protein. (787 aa)    
Predicted Functional Partners:
SCY18892.1
Hemolysin-type calcium-binding repeat-containing protein.
 
0.996
SCX83589.1
Hemolysin-type calcium-binding repeat-containing protein.
  
 
  0.824
SCX83658.1
Hemolysin-type calcium-binding repeat-containing protein.
  
 
  0.824
SCY66343.1
Hemolysin-type calcium-binding repeat-containing protein.
 
 
0.790
SCY88098.1
Hemolysin-type calcium-binding repeat-containing protein.
  
 
 
0.786
SCY90987.1
Ca2+-binding protein, RTX toxin-related.
  
     0.764
SCZ13531.1
Ca2+-binding protein, RTX toxin-related.
  
 
  0.725
SCY56678.1
Outer membrane receptor for ferrienterochelin and colicins.
    
 
 0.668
SCZ12300.1
HlyD family secretion protein.
  
    0.655
SCY32678.1
FecR family protein.
  
  
  0.643
Your Current Organism:
Microvirga guangxiensis
NCBI taxonomy Id: 549386
Other names: CGMCC 1.7666, JCM 15710, M. guangxiensis, Microvirga guangxiensis Zhang et al. 2009, Microvirga sp. 25B, strain 25B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.