STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY55304.1Allantoate deiminase. (412 aa)    
Predicted Functional Partners:
SCY90377.1
Dihydroorotase.
  
 
 0.887
SCY73432.1
OHCU decarboxylase.
  
 0.836
SCY55277.1
Acetyltransferase (GNAT) family protein.
  
 
  0.818
SCZ05231.1
Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.751
SCY94190.1
Allantoinase.
 
 
 0.744
SCZ02675.1
Glutamate synthase (NADPH/NADH) small chain.
  
 
  0.722
SCZ00376.1
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
  
 
  0.677
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
  
 
 0.650
SCY55335.1
Thioredoxin reductase (NADPH).
       0.580
SCX95959.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
     0.545
Your Current Organism:
Microvirga guangxiensis
NCBI taxonomy Id: 549386
Other names: CGMCC 1.7666, JCM 15710, M. guangxiensis, Microvirga guangxiensis Zhang et al. 2009, Microvirga sp. 25B, strain 25B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.