STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY66941.1Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-). (302 aa)    
Predicted Functional Partners:
SCY66919.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.974
SCY66895.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
  
  0.956
SCY66961.1
Putative spermidine/putrescine transport system permease protein.
 
  
 
0.921
SCZ13946.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
  
  0.843
SCZ13959.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
  
  0.843
SCY66980.1
Fructuronate reductase.
       0.777
SCX91117.1
Binding-protein-dependent transport system inner membrane component.
 
  
 
0.685
ugpC
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
  
  0.668
SCX81653.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
  
  0.666
SCY68070.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
  
  0.665
Your Current Organism:
Microvirga guangxiensis
NCBI taxonomy Id: 549386
Other names: CGMCC 1.7666, JCM 15710, M. guangxiensis, Microvirga guangxiensis Zhang et al. 2009, Microvirga sp. 25B, strain 25B
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